Table 4. This table is cited in the paper Barendse, W. et al. Mammalian Genome 8, 21 - 28. The locations of the genes mapped by linkage analysis in cattle, with comparisons to humans, mice, rats and pigs. The number of conserved syntenies and ordered segments per bovine chromosome are indicated for these loci in the column S.C. A four digit number appears, i.e., 2222 which means 2 conserved syntenies cattle-human, 2 conserved syntenies cattle-mice, 2 ordered segments cattle-human and 2 ordered segments cattle-mice. The distance in cM from the proximal part of the map is indicated so that 1:1 is chromosome1:1cM. Interesting individual and group comparisons are indicated with superscripts. Gene locations were taken from GDB, MGD, RATMAP and PiGMaP. Locus Bta Hsa Mmu Rno Ssc S.C. IFNAR1: 1:1 21q22.1 16:62.8 SOD1: 1:3 21q22.1 16:61.2 11 9 2222 KAP8: 1:0-8 POU1F1:d 1:40 3p11 16:42.7 13:116 UMPS: 1:66 (q31-q36) 3q13 CRYG8: 1:90 3 SST:d 1:90 (q23-q25) 3q28 16:19.4 KNG: 1:113 3q27 11 CRYAA: 1:139 21q22.3 17:17.4 PDE1: 2:26 3333 SSBP: 2:43-65 UA ACVR2: 2:76-100 UA UA PDE6A: 2:84-92 5q31.2-q34 18:31.0 FN1: 2:100-118 2q34 1:36.1 INHA: 2:115 2q33-q34 1:41.6 9 UA AK2: 2:125 1p34 4 FCGR1: 3:24 1q21 3:49.0 11.. OSG: 3:45 IL6:b 4:0-3 7p21-p15 5:17.0 4 UA 1434 DDC:b 4:7-17 7p11 11:7.0 14 TCRG:b 4:69-81 7p15-p14 13:10.0 17 TCRB:b 4:88-90 7q35 6:19.0 4 SYT1: 5:4 12cen-q21 10:38.5 2233 IFNG: 5:32-46 (q22-q24) 12q24.1 10:64.0 5:19 COL2A1:a 5:39 12q12-q13.2 15:47.0 LYZ: 5:37-53 (q23) 12 10:63.5 IGF1: 5:49-63 12q22-q23 10:46.0 7 5:75 MB: 5:56 22q12 15:43.7 NUBA: 5:94 CYP2D@: 5:101-117 22q13 15:47.2 IF:b 6:0-45 4q24-q25 3:87.7 1235 EGF:b 6:36 4q25 3:65.2 SPP1: 6:67 4q11-q21 5:61.0 8:140 KIT:f 6:101 4q12 5:45.2 GABRA2:f 6:104-106 4p13-p12 5:43.0 FABP-HL: 6:106-108 CSN1A: 6:111 (q26-q33) UA 5:47.0 8:15 CSN3:e 6:111 8:100-110 ALB:f 6:112-126 4q11-q14 5:54.0 8:5.0 (q12) FGFR3:f 6:124-166 4p16.3 5:20.0? QDPR: 6:138-152 4p15.3 5:30.0 PDE6B: 6:145 4p16.3 5:18.84 LDLR: 7:14-50 19p13.2 9:5.0 2535 AMH: 7:32 19p13.3 10:41.5 CSF2: 7:32 5q23-q31 IL4: 7:43 5q23-q31 11:28.0 SPARC: 7:58-96 5q31-q33 11:30.0 10 FGF1: 7:70-84 5q31.3-q33.2 18:19.0 RASA:b 7:104 (q24-ter) 5q13 13:45.0 Locus Bta Hsa Mmu Rno Ssc S.C. CPNB: 8:19 11.. LPL: 8:117-129 8p22 8:32.0 16 14q12-q14 GGTB2: 8:129 9p21-q13 4:18.6 ALDOB: 8:147 9q22.3-q31 C5: 8:187 9q33 nms SOD2:b 9:22-34 6q25.2 17:7.6 5 1212 CGA:b 9:50 6q14-q21 4:9.5 1:110-120 GJA1:b 9:90-122 6q21-q23.2 10:26.5 CLTA: 10:0-3 12q23-q24 11.. TCRA: 10:2-18 14q11.2 14:19.7 BRN: 10:23 SRN: 10:23 AKAP: 10:82 ACTG2: 11:14-54 2p13.1 UA 2222 CD8A: 11:54 2p12 6:31.5 GGTA1: 11:103 9q33-q34 2:26 SHR: 11:103 DBH: 11:138-144 9q34.3 2:15.0 LGB: 11:141 (q28) VIM:c 13:44 10p13 2:7.0 2121 CHGB: 13:66-72 20pter-p12 2:75.0 AVP: 13:68-82 20p13 2:73.0 GHRH: 13:96-110 20q11.2 2:87.0 TG:b 14:1-33 (q12-q16) 8q24 15:35.09 7 1222 IL7:b 14:37-43 8q12-q13 3:6.6 CRH:b 14:54 8q13 3:8.0 NCAM:b 15:26 11q22.2-q22.3 9:28.0 8 1333 MCAM: 15:35-39 UA PTH:f 15:51 (q22-q27) 11p15.2-p15.1 7:53.0 1 ARRB: 15:63 7:50.3 HBB:f 15:63 (q22-q27) 11p15.4 7:50.0 1q22 KCNA4:f 15:69 11p14 2:61.0 FSHB:f 15:72 (q24-ter) 11p13 2:60.0 2:37 (p16-p12) PIGR:e 16:5 (q13) 1q31-q41 UA 1111 ATP2B4:e 16:5 1q25-q32 1:70.3 14:51 FH:e 16:5 1q42.1 1:74.1 ADORA1:e 16:1-9 1q32.1 UA AT3:e 16:73 1q23-q25.1 1:84.6 FGG: 17:6 (q12-q23) 4q28 3:46.4 2q31-q34 8:20 2222 FGF2: 17:51-53 4q25-q27 3:19.9 GUCY: 17:67-71 ALDH2: 17:84-110 12q24.2 UA ADRBK2: 17:140 22q11 5:66.0 MT2A: 18:24-52 16q13 8:45.0 2222 MC1R: 18:26-50 16q24.3 8:68.0 PIM1:cg 18:99 6p21 17:16.4 GH1: 19:44-58 (q17-qter) 17q22-q24 11:65.0 12:32 (p14) 1111 MAPT: 19:60-70 17q21 11:64.0 GFAP: 19:65 17q21 11:62.0 HD5S39 20:16 5q11.2-q13.3 1232 HEXB: 20:16 5q13 13:50.0 MAP1B: 20:22-28 (q14) 5p13 HTR1A: 20:25 5cen-q11 13:57.5 ANP1: 20:55 GHR: 20:55 5p14-p12 15:4.6 16q13-q14 PRLR: 20:55 5p14-p13 15:4.6 2 Locus Bta Hsa Mmu Rno Ssc S.C. IGF1R: 21:6-24 15q25-qter 7:33.0 11.. GPX1: 22:88 3q11-q12 UA HRH1: 22:100 3p25 4 DYA: 23:5 6q21.3 1212 VEGF: 23:18 UA UA MOG: 23:30-36 6p22-p21.3 20 TNFA: 23:30-34 6p21.3 17:19.06 20 DRB: 23:32 6q21.3 17:18-23* 20 7:50-60 CYP21: 23:33 6p21.3 17:18.77 7 SMHCC: 23:33 6p21.3 17:18-23* 20 PRL: 23:41 6p22.2-p22.1 13:14.0 17 7:68 FECH: 24:0-24 18q21.1-q21.31 18:39.0 2122 PACAP: 24:15-33 CDH2: 24:28 18q12.1 18:6.0 DSC3:d 24:34 9p 18:7.4 CYB5: 24:63-73 18q22.3-q23 PRM1: 25:16-28(q12-13) 6p13.13 16:3.4 10q12 23.. EPO: 25:56-62 7q21.3-q22.1 5:84.0 PLANH: 25:69 7q22.1-q22.3 1:61.1 12 ASAT: 26:35 11.. DNTT: 26:29-41 10q23-q24 19:44.0 PSAP: 28:2-48 10q21-q22 10:27.3 12.. RBP3: 28:92 10q11.2 14:13.0 16 GSTP1: 29:74 11q13 19:0.0 1212 OPCML:d 29:82 11 9:10.0 CD5: 29:97 11q13.1 19:5.0 MAOA:e X:65 Xp11.4-p11.3 X:5.0 Total S.C. 37 53 31 35 Conserved syntenies cattle-human = 37 cattle-mouse = 53 Ordered segments cattle-human = 31 cattle-mouse = 35 UA: unassaigned blank: no reference found *: MHC region in mice a: Loci close to an evolutionarily conserved breakpoint b: Lack of conservation of synteny cattle-mice coupled to lack of conservation of gene order cattle-humans c: Conservation of synteny of human-mice but not of cattle d: Conservation of gene order or synteny cattle-mice but not for cattle-human e: Lack of conservation of distance between genes or chromosomal landmarks f: Conserved segment with different orders in cattle, humans and mice g: Compare to other loci on BTA23, HSA6p and MMU17 GDB v6.0 11 March 1996 MGD 13 March 1996 PiGMaP 14 March 1996 RATMAP 18 March 1996